Affymetrix rattoxfx annotation data (chip rattoxfxrnentrezg)


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Documentation for package ‘rattoxfxrnentrezg.db’ version 13.0.0

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rattoxfxrnentrezg Bioconductor annotation data package
rattoxfxrnentrezg.db Bioconductor annotation data package
rattoxfxrnentrezgACCNUM Map Manufacturer identifiers to Accession Numbers
rattoxfxrnentrezgALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
rattoxfxrnentrezgCHR Map Manufacturer IDs to Chromosomes
rattoxfxrnentrezgCHRLENGTHS A named vector for the length of each of the chromosomes
rattoxfxrnentrezgCHRLOC Map Manufacturer IDs to Chromosomal Location
rattoxfxrnentrezgCHRLOCEND Map Manufacturer IDs to Chromosomal Location
rattoxfxrnentrezgENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
rattoxfxrnentrezgENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
rattoxfxrnentrezgENTREZID Map between Manufacturer Identifiers and Entrez Gene
rattoxfxrnentrezgENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
rattoxfxrnentrezgENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
rattoxfxrnentrezgGENENAME Map between Manufacturer IDs and Genes
rattoxfxrnentrezgGO Map between Manufacturer IDs and Gene Ontology (GO)
rattoxfxrnentrezgGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
rattoxfxrnentrezgGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
rattoxfxrnentrezgLOCUSID Map between Manufacturer Identifiers and Entrez Gene
rattoxfxrnentrezgMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
rattoxfxrnentrezgMAPCOUNTS Number of mapped keys for the maps in package rattoxfxrnentrezg.db
rattoxfxrnentrezgORGANISM The Organism information for rattoxfxrnentrezg
rattoxfxrnentrezgORGPKG The Organism information for rattoxfxrnentrezg
rattoxfxrnentrezgPATH Mappings between probe identifiers and KEGG pathway identifiers
rattoxfxrnentrezgPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
rattoxfxrnentrezgPFAM Map Manufacturer IDs to Pfam IDs
rattoxfxrnentrezgPMID Map between Manufacturer Identifiers and PubMed Identifiers
rattoxfxrnentrezgPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
rattoxfxrnentrezgPROSITE Map Manufacturer IDs to PROSITE ID
rattoxfxrnentrezgREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
rattoxfxrnentrezgSYMBOL Map between Manufacturer Identifiers and Gene Symbols
rattoxfxrnentrezgUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
rattoxfxrnentrezgUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
rattoxfxrnentrezgUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
rattoxfxrnentrezg_dbconn Collect information about the package annotation DB
rattoxfxrnentrezg_dbfile Collect information about the package annotation DB
rattoxfxrnentrezg_dbInfo Collect information about the package annotation DB
rattoxfxrnentrezg_dbschema Collect information about the package annotation DB