Affymetrix u133x3p annotation data (chip u133x3phsug)


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Documentation for package ‘u133x3phsug.db’ version 13.0.0

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u133x3phsug Bioconductor annotation data package
u133x3phsug.db Bioconductor annotation data package
u133x3phsugACCNUM Map Manufacturer identifiers to Accession Numbers
u133x3phsugALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
u133x3phsugCHR Map Manufacturer IDs to Chromosomes
u133x3phsugCHRLENGTHS A named vector for the length of each of the chromosomes
u133x3phsugCHRLOC Map Manufacturer IDs to Chromosomal Location
u133x3phsugCHRLOCEND Map Manufacturer IDs to Chromosomal Location
u133x3phsugENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
u133x3phsugENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
u133x3phsugENTREZID Map between Manufacturer Identifiers and Entrez Gene
u133x3phsugENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
u133x3phsugENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
u133x3phsugGENENAME Map between Manufacturer IDs and Genes
u133x3phsugGO Map between Manufacturer IDs and Gene Ontology (GO)
u133x3phsugGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
u133x3phsugGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
u133x3phsugLOCUSID Map between Manufacturer Identifiers and Entrez Gene
u133x3phsugMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
u133x3phsugMAPCOUNTS Number of mapped keys for the maps in package u133x3phsug.db
u133x3phsugOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
u133x3phsugORGANISM The Organism information for u133x3phsug
u133x3phsugORGPKG The Organism information for u133x3phsug
u133x3phsugPATH Mappings between probe identifiers and KEGG pathway identifiers
u133x3phsugPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
u133x3phsugPFAM Map Manufacturer IDs to Pfam IDs
u133x3phsugPMID Map between Manufacturer Identifiers and PubMed Identifiers
u133x3phsugPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
u133x3phsugPROSITE Map Manufacturer IDs to PROSITE ID
u133x3phsugREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
u133x3phsugSYMBOL Map between Manufacturer Identifiers and Gene Symbols
u133x3phsugUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
u133x3phsugUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
u133x3phsugUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
u133x3phsug_dbconn Collect information about the package annotation DB
u133x3phsug_dbfile Collect information about the package annotation DB
u133x3phsug_dbInfo Collect information about the package annotation DB
u133x3phsug_dbschema Collect information about the package annotation DB