Affymetrix zebrafish annotation data (chip zebrafishdrentrezg)


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Documentation for package ‘zebrafishdrentrezg.db’ version 14.1.0

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zebrafishdrentrezg Bioconductor annotation data package
zebrafishdrentrezg.db Bioconductor annotation data package
zebrafishdrentrezgACCNUM Map Manufacturer identifiers to Accession Numbers
zebrafishdrentrezgALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
zebrafishdrentrezgCHR Map Manufacturer IDs to Chromosomes
zebrafishdrentrezgCHRLENGTHS A named vector for the length of each of the chromosomes
zebrafishdrentrezgCHRLOC Map Manufacturer IDs to Chromosomal Location
zebrafishdrentrezgCHRLOCEND Map Manufacturer IDs to Chromosomal Location
zebrafishdrentrezgENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
zebrafishdrentrezgENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
zebrafishdrentrezgENTREZID Map between Manufacturer Identifiers and Entrez Gene
zebrafishdrentrezgENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
zebrafishdrentrezgENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
zebrafishdrentrezgGENENAME Map between Manufacturer IDs and Genes
zebrafishdrentrezgGO Map between Manufacturer IDs and Gene Ontology (GO)
zebrafishdrentrezgGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
zebrafishdrentrezgGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
zebrafishdrentrezgLOCUSID Map between Manufacturer Identifiers and Entrez Gene
zebrafishdrentrezgMAPCOUNTS Number of mapped keys for the maps in package zebrafishdrentrezg.db
zebrafishdrentrezgORGANISM The Organism information for zebrafishdrentrezg
zebrafishdrentrezgORGPKG The Organism information for zebrafishdrentrezg
zebrafishdrentrezgPATH Mappings between probe identifiers and KEGG pathway identifiers
zebrafishdrentrezgPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
zebrafishdrentrezgPFAM Map Manufacturer IDs to Pfam IDs
zebrafishdrentrezgPMID Map between Manufacturer Identifiers and PubMed Identifiers
zebrafishdrentrezgPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
zebrafishdrentrezgPROSITE Map Manufacturer IDs to PROSITE ID
zebrafishdrentrezgREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
zebrafishdrentrezgSYMBOL Map between Manufacturer Identifiers and Gene Symbols
zebrafishdrentrezgUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
zebrafishdrentrezgUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
zebrafishdrentrezgUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
zebrafishdrentrezgZFIN Map Zfin accession numbers with Entrez Gene identifiers
zebrafishdrentrezgZFIN2PROBE Map Zfin accession numbers with Entrez Gene identifiers
zebrafishdrentrezg_dbconn Collect information about the package annotation DB
zebrafishdrentrezg_dbfile Collect information about the package annotation DB
zebrafishdrentrezg_dbInfo Collect information about the package annotation DB
zebrafishdrentrezg_dbschema Collect information about the package annotation DB