Affymetrix htratfocus annotation data (chip htratfocusrnrefseq)


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Documentation for package ‘htratfocusrnrefseq.db’ version 14.1.0

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htratfocusrnrefseq Bioconductor annotation data package
htratfocusrnrefseq.db Bioconductor annotation data package
htratfocusrnrefseqACCNUM Map Manufacturer identifiers to Accession Numbers
htratfocusrnrefseqALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
htratfocusrnrefseqCHR Map Manufacturer IDs to Chromosomes
htratfocusrnrefseqCHRLENGTHS A named vector for the length of each of the chromosomes
htratfocusrnrefseqCHRLOC Map Manufacturer IDs to Chromosomal Location
htratfocusrnrefseqCHRLOCEND Map Manufacturer IDs to Chromosomal Location
htratfocusrnrefseqENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
htratfocusrnrefseqENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
htratfocusrnrefseqENTREZID Map between Manufacturer Identifiers and Entrez Gene
htratfocusrnrefseqENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
htratfocusrnrefseqENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
htratfocusrnrefseqGENENAME Map between Manufacturer IDs and Genes
htratfocusrnrefseqGO Map between Manufacturer IDs and Gene Ontology (GO)
htratfocusrnrefseqGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
htratfocusrnrefseqGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
htratfocusrnrefseqLOCUSID Map between Manufacturer Identifiers and Entrez Gene
htratfocusrnrefseqMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
htratfocusrnrefseqMAPCOUNTS Number of mapped keys for the maps in package htratfocusrnrefseq.db
htratfocusrnrefseqORGANISM The Organism information for htratfocusrnrefseq
htratfocusrnrefseqORGPKG The Organism information for htratfocusrnrefseq
htratfocusrnrefseqPATH Mappings between probe identifiers and KEGG pathway identifiers
htratfocusrnrefseqPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
htratfocusrnrefseqPFAM Map Manufacturer IDs to Pfam IDs
htratfocusrnrefseqPMID Map between Manufacturer Identifiers and PubMed Identifiers
htratfocusrnrefseqPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
htratfocusrnrefseqPROSITE Map Manufacturer IDs to PROSITE ID
htratfocusrnrefseqREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
htratfocusrnrefseqSYMBOL Map between Manufacturer Identifiers and Gene Symbols
htratfocusrnrefseqUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
htratfocusrnrefseqUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
htratfocusrnrefseqUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
htratfocusrnrefseq_dbconn Collect information about the package annotation DB
htratfocusrnrefseq_dbfile Collect information about the package annotation DB
htratfocusrnrefseq_dbInfo Collect information about the package annotation DB
htratfocusrnrefseq_dbschema Collect information about the package annotation DB