Affymetrix hgfocus annotation data (chip hgfocushsug)


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Documentation for package ‘hgfocushsug.db’ version 14.1.0

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hgfocushsug Bioconductor annotation data package
hgfocushsug.db Bioconductor annotation data package
hgfocushsugACCNUM Map Manufacturer identifiers to Accession Numbers
hgfocushsugALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
hgfocushsugCHR Map Manufacturer IDs to Chromosomes
hgfocushsugCHRLENGTHS A named vector for the length of each of the chromosomes
hgfocushsugCHRLOC Map Manufacturer IDs to Chromosomal Location
hgfocushsugCHRLOCEND Map Manufacturer IDs to Chromosomal Location
hgfocushsugENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
hgfocushsugENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
hgfocushsugENTREZID Map between Manufacturer Identifiers and Entrez Gene
hgfocushsugENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
hgfocushsugENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
hgfocushsugGENENAME Map between Manufacturer IDs and Genes
hgfocushsugGO Map between Manufacturer IDs and Gene Ontology (GO)
hgfocushsugGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
hgfocushsugGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
hgfocushsugLOCUSID Map between Manufacturer Identifiers and Entrez Gene
hgfocushsugMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
hgfocushsugMAPCOUNTS Number of mapped keys for the maps in package hgfocushsug.db
hgfocushsugOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
hgfocushsugORGANISM The Organism information for hgfocushsug
hgfocushsugORGPKG The Organism information for hgfocushsug
hgfocushsugPATH Mappings between probe identifiers and KEGG pathway identifiers
hgfocushsugPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
hgfocushsugPFAM Map Manufacturer IDs to Pfam IDs
hgfocushsugPMID Map between Manufacturer Identifiers and PubMed Identifiers
hgfocushsugPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
hgfocushsugPROSITE Map Manufacturer IDs to PROSITE ID
hgfocushsugREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
hgfocushsugSYMBOL Map between Manufacturer Identifiers and Gene Symbols
hgfocushsugUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
hgfocushsugUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
hgfocushsugUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
hgfocushsug_dbconn Collect information about the package annotation DB
hgfocushsug_dbfile Collect information about the package annotation DB
hgfocushsug_dbInfo Collect information about the package annotation DB
hgfocushsug_dbschema Collect information about the package annotation DB