Affymetrix porcine annotation data (chip porcinessug)


[Up] [Top]

Documentation for package ‘porcinessug.db’ version 14.1.0

Help Pages

porcinessug Bioconductor annotation data package
porcinessug.db Bioconductor annotation data package
porcinessugACCNUM Map Manufacturer identifiers to Accession Numbers
porcinessugALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
porcinessugCHR Map Manufacturer IDs to Chromosomes
porcinessugENTREZID Map between Manufacturer Identifiers and Entrez Gene
porcinessugENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
porcinessugENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
porcinessugGENENAME Map between Manufacturer IDs and Genes
porcinessugGO Map between Manufacturer IDs and Gene Ontology (GO)
porcinessugGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
porcinessugGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
porcinessugLOCUSID Map between Manufacturer Identifiers and Entrez Gene
porcinessugMAPCOUNTS Number of mapped keys for the maps in package porcinessug.db
porcinessugORGANISM The Organism information for porcinessug
porcinessugORGPKG The Organism information for porcinessug
porcinessugPATH Mappings between probe identifiers and KEGG pathway identifiers
porcinessugPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
porcinessugPMID Map between Manufacturer Identifiers and PubMed Identifiers
porcinessugPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
porcinessugREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
porcinessugSYMBOL Map between Manufacturer Identifiers and Gene Symbols
porcinessugUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
porcinessugUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
porcinessugUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
porcinessug_dbconn Collect information about the package annotation DB
porcinessug_dbfile Collect information about the package annotation DB
porcinessug_dbInfo Collect information about the package annotation DB
porcinessug_dbschema Collect information about the package annotation DB