Affymetrix rattoxfx annotation data (chip rattoxfxrnug)

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Documentation for package ‘rattoxfxrnug.db’ version 14.1.0

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rattoxfxrnug Bioconductor annotation data package
rattoxfxrnug.db Bioconductor annotation data package
rattoxfxrnugACCNUM Map Manufacturer identifiers to Accession Numbers
rattoxfxrnugALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
rattoxfxrnugCHR Map Manufacturer IDs to Chromosomes
rattoxfxrnugCHRLENGTHS A named vector for the length of each of the chromosomes
rattoxfxrnugCHRLOC Map Manufacturer IDs to Chromosomal Location
rattoxfxrnugCHRLOCEND Map Manufacturer IDs to Chromosomal Location
rattoxfxrnugENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
rattoxfxrnugENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
rattoxfxrnugENTREZID Map between Manufacturer Identifiers and Entrez Gene
rattoxfxrnugENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
rattoxfxrnugENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
rattoxfxrnugGENENAME Map between Manufacturer IDs and Genes
rattoxfxrnugGO Map between Manufacturer IDs and Gene Ontology (GO)
rattoxfxrnugGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
rattoxfxrnugGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
rattoxfxrnugLOCUSID Map between Manufacturer Identifiers and Entrez Gene
rattoxfxrnugMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
rattoxfxrnugMAPCOUNTS Number of mapped keys for the maps in package rattoxfxrnug.db
rattoxfxrnugORGANISM The Organism information for rattoxfxrnug
rattoxfxrnugORGPKG The Organism information for rattoxfxrnug
rattoxfxrnugPATH Mappings between probe identifiers and KEGG pathway identifiers
rattoxfxrnugPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
rattoxfxrnugPFAM Map Manufacturer IDs to Pfam IDs
rattoxfxrnugPMID Map between Manufacturer Identifiers and PubMed Identifiers
rattoxfxrnugPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
rattoxfxrnugPROSITE Map Manufacturer IDs to PROSITE ID
rattoxfxrnugREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
rattoxfxrnugSYMBOL Map between Manufacturer Identifiers and Gene Symbols
rattoxfxrnugUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
rattoxfxrnugUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
rattoxfxrnugUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
rattoxfxrnug_dbconn Collect information about the package annotation DB
rattoxfxrnug_dbfile Collect information about the package annotation DB
rattoxfxrnug_dbInfo Collect information about the package annotation DB
rattoxfxrnug_dbschema Collect information about the package annotation DB