Affymetrix rattoxfx annotation data (chip rattoxfxrnrefseq)


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Documentation for package ‘rattoxfxrnrefseq.db’ version 15.1.0

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rattoxfxrnrefseq Bioconductor annotation data package
rattoxfxrnrefseq.db Bioconductor annotation data package
rattoxfxrnrefseqACCNUM Map Manufacturer identifiers to Accession Numbers
rattoxfxrnrefseqALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
rattoxfxrnrefseqCHR Map Manufacturer IDs to Chromosomes
rattoxfxrnrefseqCHRLENGTHS A named vector for the length of each of the chromosomes
rattoxfxrnrefseqCHRLOC Map Manufacturer IDs to Chromosomal Location
rattoxfxrnrefseqCHRLOCEND Map Manufacturer IDs to Chromosomal Location
rattoxfxrnrefseqENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
rattoxfxrnrefseqENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
rattoxfxrnrefseqENTREZID Map between Manufacturer Identifiers and Entrez Gene
rattoxfxrnrefseqENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
rattoxfxrnrefseqENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
rattoxfxrnrefseqGENENAME Map between Manufacturer IDs and Genes
rattoxfxrnrefseqGO Map between Manufacturer IDs and Gene Ontology (GO)
rattoxfxrnrefseqGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
rattoxfxrnrefseqGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
rattoxfxrnrefseqLOCUSID Map between Manufacturer Identifiers and Entrez Gene
rattoxfxrnrefseqMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
rattoxfxrnrefseqMAPCOUNTS Number of mapped keys for the maps in package rattoxfxrnrefseq.db
rattoxfxrnrefseqORGANISM The Organism information for rattoxfxrnrefseq
rattoxfxrnrefseqORGPKG The Organism information for rattoxfxrnrefseq
rattoxfxrnrefseqPATH Mappings between probe identifiers and KEGG pathway identifiers
rattoxfxrnrefseqPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
rattoxfxrnrefseqPFAM Map Manufacturer IDs to Pfam IDs
rattoxfxrnrefseqPMID Map between Manufacturer Identifiers and PubMed Identifiers
rattoxfxrnrefseqPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
rattoxfxrnrefseqPROSITE Map Manufacturer IDs to PROSITE ID
rattoxfxrnrefseqREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
rattoxfxrnrefseqSYMBOL Map between Manufacturer Identifiers and Gene Symbols
rattoxfxrnrefseqUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
rattoxfxrnrefseqUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
rattoxfxrnrefseqUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
rattoxfxrnrefseq_dbconn Collect information about the package annotation DB
rattoxfxrnrefseq_dbfile Collect information about the package annotation DB
rattoxfxrnrefseq_dbInfo Collect information about the package annotation DB
rattoxfxrnrefseq_dbschema Collect information about the package annotation DB