Affymetrix hthgu133b annotation data (chip hthgu133bhsug)


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Documentation for package ‘hthgu133bhsug.db’ version 15.1.0

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hthgu133bhsug Bioconductor annotation data package
hthgu133bhsug.db Bioconductor annotation data package
hthgu133bhsugACCNUM Map Manufacturer identifiers to Accession Numbers
hthgu133bhsugALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
hthgu133bhsugCHR Map Manufacturer IDs to Chromosomes
hthgu133bhsugCHRLENGTHS A named vector for the length of each of the chromosomes
hthgu133bhsugCHRLOC Map Manufacturer IDs to Chromosomal Location
hthgu133bhsugCHRLOCEND Map Manufacturer IDs to Chromosomal Location
hthgu133bhsugENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
hthgu133bhsugENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
hthgu133bhsugENTREZID Map between Manufacturer Identifiers and Entrez Gene
hthgu133bhsugENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
hthgu133bhsugENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
hthgu133bhsugGENENAME Map between Manufacturer IDs and Genes
hthgu133bhsugGO Map between Manufacturer IDs and Gene Ontology (GO)
hthgu133bhsugGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
hthgu133bhsugGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
hthgu133bhsugLOCUSID Map between Manufacturer Identifiers and Entrez Gene
hthgu133bhsugMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
hthgu133bhsugMAPCOUNTS Number of mapped keys for the maps in package hthgu133bhsug.db
hthgu133bhsugOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
hthgu133bhsugORGANISM The Organism information for hthgu133bhsug
hthgu133bhsugORGPKG The Organism information for hthgu133bhsug
hthgu133bhsugPATH Mappings between probe identifiers and KEGG pathway identifiers
hthgu133bhsugPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
hthgu133bhsugPFAM Map Manufacturer IDs to Pfam IDs
hthgu133bhsugPMID Map between Manufacturer Identifiers and PubMed Identifiers
hthgu133bhsugPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
hthgu133bhsugPROSITE Map Manufacturer IDs to PROSITE ID
hthgu133bhsugREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
hthgu133bhsugSYMBOL Map between Manufacturer Identifiers and Gene Symbols
hthgu133bhsugUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
hthgu133bhsugUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
hthgu133bhsugUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
hthgu133bhsug_dbconn Collect information about the package annotation DB
hthgu133bhsug_dbfile Collect information about the package annotation DB
hthgu133bhsug_dbInfo Collect information about the package annotation DB
hthgu133bhsug_dbschema Collect information about the package annotation DB