Affymetrix hthgu133pluspm annotation data (chip hthgu133pluspmhsug)


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Documentation for package ‘hthgu133pluspmhsug.db’ version 15.1.0

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hthgu133pluspmhsug Bioconductor annotation data package
hthgu133pluspmhsug.db Bioconductor annotation data package
hthgu133pluspmhsugACCNUM Map Manufacturer identifiers to Accession Numbers
hthgu133pluspmhsugALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
hthgu133pluspmhsugCHR Map Manufacturer IDs to Chromosomes
hthgu133pluspmhsugCHRLENGTHS A named vector for the length of each of the chromosomes
hthgu133pluspmhsugCHRLOC Map Manufacturer IDs to Chromosomal Location
hthgu133pluspmhsugCHRLOCEND Map Manufacturer IDs to Chromosomal Location
hthgu133pluspmhsugENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
hthgu133pluspmhsugENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
hthgu133pluspmhsugENTREZID Map between Manufacturer Identifiers and Entrez Gene
hthgu133pluspmhsugENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
hthgu133pluspmhsugENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
hthgu133pluspmhsugGENENAME Map between Manufacturer IDs and Genes
hthgu133pluspmhsugGO Map between Manufacturer IDs and Gene Ontology (GO)
hthgu133pluspmhsugGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
hthgu133pluspmhsugGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
hthgu133pluspmhsugLOCUSID Map between Manufacturer Identifiers and Entrez Gene
hthgu133pluspmhsugMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
hthgu133pluspmhsugMAPCOUNTS Number of mapped keys for the maps in package hthgu133pluspmhsug.db
hthgu133pluspmhsugOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
hthgu133pluspmhsugORGANISM The Organism information for hthgu133pluspmhsug
hthgu133pluspmhsugORGPKG The Organism information for hthgu133pluspmhsug
hthgu133pluspmhsugPATH Mappings between probe identifiers and KEGG pathway identifiers
hthgu133pluspmhsugPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
hthgu133pluspmhsugPFAM Map Manufacturer IDs to Pfam IDs
hthgu133pluspmhsugPMID Map between Manufacturer Identifiers and PubMed Identifiers
hthgu133pluspmhsugPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
hthgu133pluspmhsugPROSITE Map Manufacturer IDs to PROSITE ID
hthgu133pluspmhsugREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
hthgu133pluspmhsugSYMBOL Map between Manufacturer Identifiers and Gene Symbols
hthgu133pluspmhsugUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
hthgu133pluspmhsugUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
hthgu133pluspmhsugUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
hthgu133pluspmhsug_dbconn Collect information about the package annotation DB
hthgu133pluspmhsug_dbfile Collect information about the package annotation DB
hthgu133pluspmhsug_dbInfo Collect information about the package annotation DB
hthgu133pluspmhsug_dbschema Collect information about the package annotation DB