Affymetrix xcel annotation data (chip xcelhsrefseq)

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Documentation for package ‘xcelhsrefseq.db’ version 17.1.0

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xcelhsrefseq Bioconductor annotation data package
xcelhsrefseq.db Bioconductor annotation data package
xcelhsrefseqACCNUM Map Manufacturer identifiers to Accession Numbers
xcelhsrefseqALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
xcelhsrefseqCHR Map Manufacturer IDs to Chromosomes
xcelhsrefseqCHRLENGTHS A named vector for the length of each of the chromosomes
xcelhsrefseqCHRLOC Map Manufacturer IDs to Chromosomal Location
xcelhsrefseqCHRLOCEND Map Manufacturer IDs to Chromosomal Location
xcelhsrefseqENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
xcelhsrefseqENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
xcelhsrefseqENTREZID Map between Manufacturer Identifiers and Entrez Gene
xcelhsrefseqENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
xcelhsrefseqENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
xcelhsrefseqGENENAME Map between Manufacturer IDs and Genes
xcelhsrefseqGO Maps between manufacturer IDs and Gene Ontology (GO) IDs
xcelhsrefseqGO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
xcelhsrefseqGO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
xcelhsrefseqLOCUSID Map between Manufacturer Identifiers and Entrez Gene
xcelhsrefseqMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
xcelhsrefseqMAPCOUNTS Number of mapped keys for the maps in package xcelhsrefseq.db
xcelhsrefseqOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
xcelhsrefseqORGANISM The Organism information for xcelhsrefseq
xcelhsrefseqORGPKG The Organism information for xcelhsrefseq
xcelhsrefseqPATH Mappings between probe identifiers and KEGG pathway identifiers
xcelhsrefseqPATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
xcelhsrefseqPFAM Map Manufacturer IDs to Pfam IDs
xcelhsrefseqPMID Maps between Manufacturer Identifiers and PubMed Identifiers
xcelhsrefseqPMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
xcelhsrefseqPROSITE Map Manufacturer IDs to PROSITE ID
xcelhsrefseqREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
xcelhsrefseqSYMBOL Map between Manufacturer Identifiers and Gene Symbols
xcelhsrefseqUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
xcelhsrefseqUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
xcelhsrefseqUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
xcelhsrefseq_dbconn Collect information about the package annotation DB
xcelhsrefseq_dbfile Collect information about the package annotation DB
xcelhsrefseq_dbInfo Collect information about the package annotation DB
xcelhsrefseq_dbschema Collect information about the package annotation DB