Affymetrix hugene11st annotation data (chip hugene11sthsrefseq)


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Documentation for package ‘hugene11sthsrefseq.db’ version 22.0.0

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hugene11sthsrefseq Bioconductor annotation data package
hugene11sthsrefseq.db Bioconductor annotation data package
hugene11sthsrefseqACCNUM Map Manufacturer identifiers to Accession Numbers
hugene11sthsrefseqALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
hugene11sthsrefseqCHR Map Manufacturer IDs to Chromosomes
hugene11sthsrefseqCHRLENGTHS A named vector for the length of each of the chromosomes
hugene11sthsrefseqCHRLOC Map Manufacturer IDs to Chromosomal Location
hugene11sthsrefseqCHRLOCEND Map Manufacturer IDs to Chromosomal Location
hugene11sthsrefseqENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
hugene11sthsrefseqENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
hugene11sthsrefseqENTREZID Map between Manufacturer Identifiers and Entrez Gene
hugene11sthsrefseqENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
hugene11sthsrefseqENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
hugene11sthsrefseqGENENAME Map between Manufacturer IDs and Genes
hugene11sthsrefseqGO Maps between manufacturer IDs and Gene Ontology (GO) IDs
hugene11sthsrefseqGO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
hugene11sthsrefseqGO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
hugene11sthsrefseqLOCUSID Map between Manufacturer Identifiers and Entrez Gene
hugene11sthsrefseqMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
hugene11sthsrefseqMAPCOUNTS Number of mapped keys for the maps in package hugene11sthsrefseq.db
hugene11sthsrefseqOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
hugene11sthsrefseqORGANISM The Organism information for hugene11sthsrefseq
hugene11sthsrefseqORGPKG The Organism information for hugene11sthsrefseq
hugene11sthsrefseqPATH Mappings between probe identifiers and KEGG pathway identifiers
hugene11sthsrefseqPATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
hugene11sthsrefseqPFAM Maps between Manufacturer Identifiers and PFAM Identifiers
hugene11sthsrefseqPMID Maps between Manufacturer Identifiers and PubMed Identifiers
hugene11sthsrefseqPMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
hugene11sthsrefseqPROSITE Maps between Manufacturer Identifiers and PROSITE Identifiers
hugene11sthsrefseqREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
hugene11sthsrefseqSYMBOL Map between Manufacturer Identifiers and Gene Symbols
hugene11sthsrefseqUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
hugene11sthsrefseqUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
hugene11sthsrefseqUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
hugene11sthsrefseq_dbconn Collect information about the package annotation DB
hugene11sthsrefseq_dbfile Collect information about the package annotation DB
hugene11sthsrefseq_dbInfo Collect information about the package annotation DB
hugene11sthsrefseq_dbschema Collect information about the package annotation DB