Affymetrix chogene21st annotation data (chip chogene21stmmrefseq)

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Documentation for package ‘chogene21stmmrefseq.db’ version 23.0.0

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chogene21stmmrefseq Bioconductor annotation data package
chogene21stmmrefseq.db Bioconductor annotation data package
chogene21stmmrefseqACCNUM Map Manufacturer identifiers to Accession Numbers
chogene21stmmrefseqALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
chogene21stmmrefseqCHR Map Manufacturer IDs to Chromosomes
chogene21stmmrefseqCHRLENGTHS A named vector for the length of each of the chromosomes
chogene21stmmrefseqCHRLOC Map Manufacturer IDs to Chromosomal Location
chogene21stmmrefseqCHRLOCEND Map Manufacturer IDs to Chromosomal Location
chogene21stmmrefseqENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
chogene21stmmrefseqENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
chogene21stmmrefseqENTREZID Map between Manufacturer Identifiers and Entrez Gene
chogene21stmmrefseqENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
chogene21stmmrefseqENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
chogene21stmmrefseqGENENAME Map between Manufacturer IDs and Genes
chogene21stmmrefseqGO Maps between manufacturer IDs and Gene Ontology (GO) IDs
chogene21stmmrefseqGO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
chogene21stmmrefseqGO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
chogene21stmmrefseqLOCUSID Map between Manufacturer Identifiers and Entrez Gene
chogene21stmmrefseqMAPCOUNTS Number of mapped keys for the maps in package chogene21stmmrefseq.db
chogene21stmmrefseqMGI Map MGI gene accession numbers with manufacturer identifiers
chogene21stmmrefseqMGI2PROBE Map MGI gene accession numbers with manufacturer identifiers
chogene21stmmrefseqORGANISM The Organism information for chogene21stmmrefseq
chogene21stmmrefseqORGPKG The Organism information for chogene21stmmrefseq
chogene21stmmrefseqPATH Mappings between probe identifiers and KEGG pathway identifiers
chogene21stmmrefseqPATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
chogene21stmmrefseqPFAM Maps between Manufacturer Identifiers and PFAM Identifiers
chogene21stmmrefseqPMID Maps between Manufacturer Identifiers and PubMed Identifiers
chogene21stmmrefseqPMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
chogene21stmmrefseqPROSITE Maps between Manufacturer Identifiers and PROSITE Identifiers
chogene21stmmrefseqREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
chogene21stmmrefseqSYMBOL Map between Manufacturer Identifiers and Gene Symbols
chogene21stmmrefseqUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
chogene21stmmrefseqUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
chogene21stmmrefseqUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
chogene21stmmrefseq_dbconn Collect information about the package annotation DB
chogene21stmmrefseq_dbfile Collect information about the package annotation DB
chogene21stmmrefseq_dbInfo Collect information about the package annotation DB
chogene21stmmrefseq_dbschema Collect information about the package annotation DB