Affymetrix chicken annotation data (chip chickenggrefseq)

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Documentation for package ‘chickenggrefseq.db’ version 25.0.0

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chickenggrefseq Bioconductor annotation data package
chickenggrefseq.db Bioconductor annotation data package
chickenggrefseqACCNUM Map Manufacturer identifiers to Accession Numbers
chickenggrefseqALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
chickenggrefseqCHR Map Manufacturer IDs to Chromosomes
chickenggrefseqCHRLENGTHS A named vector for the length of each of the chromosomes
chickenggrefseqCHRLOC Map Manufacturer IDs to Chromosomal Location
chickenggrefseqCHRLOCEND Map Manufacturer IDs to Chromosomal Location
chickenggrefseqENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
chickenggrefseqENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
chickenggrefseqENTREZID Map between Manufacturer Identifiers and Entrez Gene
chickenggrefseqENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
chickenggrefseqENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
chickenggrefseqGENENAME Map between Manufacturer IDs and Genes
chickenggrefseqGO Maps between manufacturer IDs and Gene Ontology (GO) IDs
chickenggrefseqGO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
chickenggrefseqGO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
chickenggrefseqLOCUSID Map between Manufacturer Identifiers and Entrez Gene
chickenggrefseqMAPCOUNTS Number of mapped keys for the maps in package chickenggrefseq.db
chickenggrefseqORGANISM The Organism information for chickenggrefseq
chickenggrefseqORGPKG The Organism information for chickenggrefseq
chickenggrefseqPATH Mappings between probe identifiers and KEGG pathway identifiers
chickenggrefseqPATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
chickenggrefseqPFAM Maps between Manufacturer Identifiers and PFAM Identifiers
chickenggrefseqPMID Maps between Manufacturer Identifiers and PubMed Identifiers
chickenggrefseqPMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
chickenggrefseqPROSITE Maps between Manufacturer Identifiers and PROSITE Identifiers
chickenggrefseqREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
chickenggrefseqSYMBOL Map between Manufacturer Identifiers and Gene Symbols
chickenggrefseqUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
chickenggrefseqUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
chickenggrefseqUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
chickenggrefseq_dbconn Collect information about the package annotation DB
chickenggrefseq_dbfile Collect information about the package annotation DB
chickenggrefseq_dbInfo Collect information about the package annotation DB
chickenggrefseq_dbschema Collect information about the package annotation DB